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Clinical and Vaccine Immunology, July 2007, p. 847-854, Vol. 14, No. 7
1071-412X/07/$08.00+0 doi:10.1128/CVI.00041-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

,
Muki S. Shey,1,
Ronnett Seldon,1,
Molebogeng X. Rangaka,1,
Gilles van Cutsem,3,
Marcela Simsova,4,
Zuzana Marcekova,4
Peter Sebo,4
Nigel Curtis,2,
Lavanya Diwakar,1,
Graeme A. Meintjes,1,
Claude Leclerc,5
Robert J. Wilkinson,1,6,
and
Katalin A. Wilkinson1,6,
*
Institute of Infectious Diseases and Molecular Medicine, Faculty of Health Sciences, University of Cape Town, Observatory 7925, South Africa,1 Department of Paediatrics, University of Melbourne, Infectious Diseases Unit, Department of General Medicine, and Murdoch Children's Research Institute, Royal Children's Hospital Melbourne, Parkville, Victoria, Australia,2 Médecins Sans Frontières, Khayelitsha site B, South Africa,3 Institute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic,4 Unite de Régulation Immunitaires et Vaccinologie, Inserm E352, Institut Pasteur, Paris, France,5 Wellcome Trust Center for Research in Clinical Tropical Medicine, Division of Medicine, Imperial College London, London, United Kingdom6
Received 24 December 2006/ Returned for modification 27 March 2007/ Accepted 8 May 2007
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Recent genome-driven advances in Mycobacterium tuberculosis antigen discovery has led to new avenues for the diagnosis of TB (2, 5, 20). Two of the most widely studied antigens are region of difference 1 (RD1)-based early-secreted antigenic target 6 (ESAT-6) and culture filtrate protein 10 (CFP-10), which form the basis of two recently commercialized blood-based immunodiagnostic tests for TB (T-SPOT.TB and QuantiFERON TB-Gold) (23). These assays potentially represent a significant improvement over the tuberculin skin test (TST) for the detection of latent TB infection (LTBI) and active TB disease in adults, particularly in areas where BCG vaccination rates are high and exposure to nontuberculous mycobacteria is ubiquitous (2, 10, 23). Furthermore, in HIV-infected (HIV+) persons, the highest-risk group for disease progression and in whom the sensitivity of the TST is significantly reduced (1, 11, 17), the assays may offer a considerable advantage for the diagnosis of TB. Such assays, however, have not been extensively evaluated in HIV+ persons living in high TB prevalence areas. In addition, they require a relatively large volume of blood, which is important when considering their application in pediatric practice.
We have recently shown that the genetically detoxified Bordetella pertussis adenylate cyclase (CyaA) is able to efficiently deliver M. tuberculosis-specific antigens for presentation to both human and bovine T cells (28, 29). CyaA facilitates direct translocation of the inserted antigens across the cytoplasmic membrane of target cells, by using CD11b associated with the β2 integrin (CD11b/CD18) as its specific receptor (14, 15, 25). Since CD11b/CD18 (also known as MAC-1) is mainly expressed on macrophages and dendritic cells, CyaA specifically targets professional antigen-presenting cells. Previous work has shown that the inserted antigen can be efficiently presented via both the classical major histocompatibility complex (MHC) class I and II antigen-processing pathways to CD8+ and CD4+ T cells and that T-cell recognition is sensitive to antibody blockade of MHC classes I and II, anti-CD11b, and chloroquine (inhibitor of endosomal processing that therefore decreases presentation via MHC class II) (19, 24, 28, 29).
We have used this antigen delivery vector in a low-volume whole-blood-based gamma interferon (IFN-
) release assay (IFNGRA) for detecting LTBI in both adults and school children and showed that delivery by CyaA most efficiently enhanced the detection of IFN-
in people who had a low or undetectable response to native TB antigens (3, 29). As people with immune suppression might have low TB-specific T-cell responses, we were specifically interested in determining whether LTBI could be detected in HIV+ persons with this novel whole-blood culture system. As part of an existing study comparing the performance of commercial IFNGRA for the detection of LTBI in HIV+ persons (22), we had the opportunity to evaluate T-cell responses to recombinant CyaA-carrying ESAT-6 and CFP-10. We also evaluated two other antigens that are immunodominant in humans, alpha-crystallin 2 (Acr2) and TB10.3. Acr2 is a member of the alpha-crystallin family of small heat shock proteins that we have recently identified and found to be infection stage specific; high frequencies of IFN-
-secreting T cells responsive to this antigen have been detected in persons with recent exposure to infectious TB (30). TB10.3 is a member of the ESAT-6 family that has recently been implicated in protection against experimental bovine TB (16, 26). By comparing the results of the IFNGRA to those of TST in both HIV+ and HIV-negative (HIV–) persons, we aimed to determine whether these low blood volume assays could be used to diagnose TB infection in high-risk patient groups.
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5 mm in the HIV+ and HIV+PTB groups and
15 mm in the HIV– group. The presence of a BCG scar was recorded, and TB contact history was documented. Isoniazid preventive treatment was offered to those with a positive TST result according to South African national guidelines, and HIV+ persons with a CD4 count of less than 200 were referred for antiretroviral treatment. Recombinant antigen and CyaA toxoid construction. Antigenic stimulants included purified native recombinant ESAT-6, CFP-10, Acr2, and TB10.3 proteins, as well as their fusions within the recombinant CyaA proteins carrying these antigens inserted at two different permissive positions of the adenylate cyclase activity domain (336 or 224, resulting in detoxified CyaA). The native antigens and CyaA-TB antigen fusions (CyaA/336-ESAT-6, CyaA/336-CFP-10, CyaA/224-CFP-10, CyaA/336-Acr2, and CyaA/336-TB10.3) were constructed, expressed in Escherichia coli, and purified close to homogeneity as previously described (29). The open reading frames that encode Acr2 and TB10.3 were amplified by PCR with primer pairs 5'-GATGTGTACATATGAACAATCTCGCATTGTGGTCG and 3'-CATGTGTACAGTAAGCTTCGTGATGGCGATGCGCGC for the Acr2 antigen and 5'-GTAAAAAGCTTTATGTCGCAGATTATGTACAACTAT and 3'-AGCTAAAGCTTTTGCCGCCCCACTTGGCGGCTTC for TB10.3, respectively. The amplified fragments were cloned as previously described (29) and entirely sequence verified for absence of mutations before production of the corresponding native TB antigens and CyaA-TB antigen fusions (further details will be provided on request to sebo@biomed.cas.cz).
Antigen-specific IFNGRA.
The whole-blood assay and measurement of IFN-
by enzyme-linked immunosorbent assay (ELISA) were performed as previously described (29). Briefly, venous blood was collected, diluted 1:10 with RPMI 1640 medium supplemented with glutamine, and processed within 4 h of sampling. Aliquots (180 µl) of diluted blood were plated in 96-well U plates (Nunc) with stimulating antigens (20 µl) in duplicate wells. Phytohemagglutinin (PHA; Sigma) at 5 µg/ml was included as a positive control. Negative controls included unstimulated wells (nil) and wells containing mock CyaA toxoid (CyaA-E5) with no antigenic insert. Following a 72-h culture at 37°C in a CO2 incubator, supernatants were harvested and immediately frozen for subsequent IFN-
measurements by ELISA.
The ELISA was carried out according to the manufacturer's instructions. Briefly, 96-well flat-bottom plates were coated overnight at 4°C with purified mouse anti-IFN-
(BD Pharmingen 554548). Following washing and blocking, 100 µl of IFN-
standards (from 10 pg/ml to 10,000 pg/ml) and culture supernatants were added in duplicate wells and incubated overnight at 4°C. After washing, the wells were plated with biotinylated mouse anti-human IFN-
(BD Pharmingen 554550) and incubated for 45 min at room temperature. Following a further washing step, wells were incubated with streptavidin-peroxidase (Sigma) for 30 min. ortho-Phenylenediamine hydrochloride was used as the substrate for detection, and 2 N H2SO4 was used to stop color development. Optical densities were read at 490 nm on a plate reader, and IFN-
concentrations were calculated from standard curves.
For analysis, we defined a positive whole-blood IFNGRA according to the criteria in Table 1. Values were chosen to reflect recommended cutoff values in commercially available whole-blood IFNGRAs (21). Background values in the nil and mock CyaA-E5-containing wells were subtracted from values in the native-antigen (ESAT-6, CFP-10, Acr2, and TB10.3) and CyaA-TB antigen fusion (CyaA/336-ESAT-6, CyaA/336-CFP-10, CyaA/224-CFP-10, CyaA/336-Acr2, and CyaA/336-TB10.3) wells, respectively, as previously described (29). A background-corrected value of greater than or equal to 70 pg/ml in response to test antigens, and when the absolute value was more than 1.5 times the background response (nil or mock CyaA-E5), was deemed positive. Results were classified as indeterminate when the corrected test antigen response was less than 70 pg/ml in the presence of an inadequate PHA response (PHA minus nil being <100 pg/ml) or when absolute values were less than 1.5 times the background responses.
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TABLE 1. Criteria for interpretation of the whole-blood IFNGRA for both native antigens and CyaA constructs
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Determination of the optimum concentrations of CyaA-TB antigen fusions.
A range of concentrations of 0.005 to 50 nM, representing the same molar amounts of native (recombinant) TB antigens and CyaA-TB antigen fusions, were tested in HIV+ and HIV– persons in a series of dose-response experiments. As not all of the persons responded to all of the antigens and the amount of blood available restricted the number of antigens we could test at any single time, the number of persons tested varied between antigenic preparations. HIV+ persons had lower IFN-
responses overall compared to HIV– persons (Fig. 1). Delivery of ESAT-6, CFP-10, and Acr2 by CyaA reduced the amount of antigen required to obtain optimal recognition by approximately 10-fold in both HIV+ and HIV– persons (Fig. 1A to F). Interestingly, in the case of the TB10.3 antigen, CyaA presentation did not reduce the amount of antigen required for optimal recognition (Fig. 1G and H). On the basis of these results, we elected to use equivalent concentrations of CyaA-TB antigen fusions at 5 nM and the native TB antigens at a 50 nM final concentration in further experiments, except for the TB10.3 antigen, which was used at 5 nM for both native and CyaA fusion experiments.
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FIG. 1. Dose-response curves of HIV-uninfected and HIV-infected persons. (A and B) Responses of six HIV-uninfected and eight HIV-infected persons to CyaA-ESAT-6 ( ), CyaA alone (x), [CyaA-ESAT-6]-CyaA (), and ESAT-6 ( ). Panels C to H represent corrected results, where the response to mock CyaA-E5 is already subtracted (see Materials and Methods). Open circles represent the native TB antigen, black filled circles represent CyaA carrying the antigen inserted at position 336, and black triangles (panels C and D) represent CyaA carrying the antigen inserted at position 224. Data are means ± standards errors.
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responses to both native TB antigens and CyaA-TB antigen fusions were greater in HIV– persons, the differences were not statistically significant, except in the case of CyaA-ESAT-6 (Table 2). On the basis of our criteria (Table 1), the number of assays scored positive, negative, or indeterminate with the CyaA-TB antigen fusions (5 nM) was similar to that with the native TB antigens (50 nM) for both HIV+ and HIV– persons, confirming the overall equivalence between antigens at these concentrations (Table 3). |
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TABLE 2. IFN- results for HIV-uninfected, HIV-infected, and HIV+PTB patients
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TABLE 3. Whole-blood IFNGRA results for HIV-infected and HIV-uninfected persons
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FIG. 2. (A) Whole-blood IFN- responses of HIV-infected people with low responses (<250 pg/ml) to the native TB antigen, CyaA-ESAT-6 (n = 16), CyaA-CFP-10 (n = 14), and CyaA-TB10.3 (n = 10). (B) Whole-blood IFN- responses of HIV-infected patients with TB with low responses (<250 pg/ml) to the native TB antigen, CyaA-ESAT-6 (n = 16), CyaA-CFP-10 (n = 13), and CyaA-TB10.3 (n = 14). Horizontal bars represent median values.
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responses to mock CyaA-E5 to be higher in the HIV+PTB group compared to those of the HIV+ group, the difference was not statistically significant (295 [0 to 1,149] versus 652 [170 to 1,870] pg/ml; P = 0.08). Within the HIV+PTB group, the median IFN-
responses were higher for ESAT-6 and CFP-10 when these antigens were delivered by CyaA although no difference was statistically significant (Table 2). When the patients were classified as low responders according to their responses to the native TB antigens, delivery by CyaA led to a significant increase in responses to CyaA/224-CFP-10 and TB10.3 but not to ESAT-6 or Acr2, respectively (Fig. 2B and data not shown). On the basis of our criteria for defining a positive response, the IFNGRA was more likely to be positive when the TB antigens were presented in the form of CyaA rather than as native TB antigens. Of 29 (81%) patients who returned for TST readings, a positive result (>5 mm) was recorded in 19 (65%). When the results of the IFNGRA (both native TB antigens and CyaA-TB antigen fusions) were combined, 25 (86%) HIV+PTB patients yielded positive test results. Twenty (69%) were positive for ESAT-6 and/or CFP-10, and 23 (79%) were positive for CyaA-ESAT-6 and/or CyaA-CFP-10. Therefore, within this group with relatively advanced immunosuppression (median CD4 level, 167 cells/µl), responses in the IFNGRA were fairly well maintained.
Comparison of IFNGRA results with those of the TST in HIV+ and HIV– persons. TST results were available for 102 (86%) of the 119 patients. The TST was positive for 20 (55%) HIV+ persons and 25 (68%) HIV– persons (Table 4). In the HIV+ group, 25 (69%) persons responded to native TB antigens in the IFNGRA, with 20 (56%) responding to the CyaA-TB antigen fusions (Table 4). However, when the results of the two assays were combined, 31 (86%) individuals scored a positive test result, significantly more than that for the TST (P = 0.008). In the HIV– group, a similar proportion responded to the native and CyaA-TB antigen fusions. When the results of the two assays were combined, 37 (100%) HIV– persons were scored positive, compared to 25 by the TST (P = 0.0002).
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TABLE 4. Numbers of positive IFNGRA results for HIV-infected and HIV-uninfected persons with presumed LTBI
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responses and relationships to absolute CD4 counts.
The magnitudes of IFN-
responses were assessed in relation to absolute CD4 counts. CD4 counts were available for 62 (82%) HIV+ persons (31 HIV+, 31 HIV+PTB). The median (IQR) CD4 counts in the HIV+ and HIV+PTB groups were 462 (287 to 628) and 167 (83 to 403) cells/µl, respectively (P = 0.0006). Although the median CD4 count was lower in the HIV+PTB group than in the HIV+ group, there was no statistically significant difference between the median PHA IFN-
responses of the groups (592 [0 to 4,680] versus 1,741 [337 to 6,475] pg/ml; P = 0.09). A significantly higher proportion of patients in the HIV+PTB group had a CD4 count of less than 200 cells/µl (17/31 versus 6/31; P = 0.008). The median PHA responses of HIV+ persons with absolute CD4 counts of less than 200 cells/µl were similar to those of persons with absolute CD4 counts of greater than 200 cells/µl (1,366 [0 to 5,142] versus 1,022 [167 to 6,990] pg/ml; P = 0.553). Within the HIV+ and HIV+PTB groups, we found no relationship between the CD4 count and the response to ESAT-6, CFP-10, or the recombinant CyaA-TB antigen fusions. |
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responses independent of the CD4 counts (13). As part of a larger cohort, Liebeschuetz et al. reported a sensitivity of 70% for the detection of active TB disease in HIV+ children residing in an area where TB is endemic (18). In a low-incidence setting, Brock et al. reported promising findings obtained with a whole-blood IFNGRA for the detection of LTBI in HIV+ persons but found a higher rate of indeterminate results in those with advanced immunosuppression (6). Finally, a recent study comparing two forms of an IFNGRA (T-Spot.TB and QuantiFERONTB Gold) with the TST for the detection of LTBI in HIV+ and HIV– adults found the sensitivity of an IFNGRA to be relatively unimpaired by moderately advanced HIV infection (22).
In a previous study, we showed that CyaA carrying ESAT-6 and CFP-10 was able to restimulate T cells from more than 90% of HIV-negative patients with active TB and healthy sensitized donors and that CyaA delivery decreased the molar amount of antigen required to restimulate T cells (29). In the present study, we found that HIV+ persons had a lower magnitude of IFN-
responses overall in response to test antigens. However, the ex vivo responses to TB antigens were maintained in the context of HIV infection, and CyaA delivery decreased by approximately 10-fold the amount of ESAT-6, CFP-10, and Acr2 required to restimulate T cells. Furthermore, the responses of low-responding HIV-infected people with presumed LTBI were enhanced when ESAT-6 and CFP-10 were delivered by CyaA. Thus, our confirmatory findings in this study including both HIV+ and HIV– persons is significant for two reasons; they show that (i) these results are reproducible in a different ethnic group on a different continent and (ii) the ex vivo stimulation of M. tuberculosis-specific T cells by CyaA-TB antigen fusions is maintained in the context of HIV infection.
To investigate the diagnostic potential of the CyaA vector, we assessed its performance in HIV-positive persons with active pulmonary TB. With predefined cutoff criteria that relate closely to commercial assays, we found that 79% of our patients tested positive in response to TB antigens delivered by CyaA, with this value increasing to 86% when the responses to both CyaA-TB and native TB antigens were combined. Although we expected the magnitudes of the responses in the whole-blood assays to relate to CD4 counts, we found no such correlation, in agreement with the findings by Dheda et al. (13). Importantly, the sensitivity of this IFNGRA for the detection of active TB disease compares favorably with data from other available studies with different IFNGRAs in HIV+ persons (7, 18).
Applying similar criteria to the group of asymptomatic HIV+ and HIV– persons, we found a very high rate of positive assay results, with 56% of HIV+ and 81% of HIV– persons responding in the IFNGRA incorporating CyaA as a delivery vector for TB antigens. Again, combining the responses to both native antigens and CyaA-TB antigen fusions increased the proportion of individuals testing positive in both of these groups. Thus, our findings suggest that a significant proportion of this population is infected with TB, which is of significant public health importance.
A significant drawback of the commercial IFNGRA, particularly for use in children, is the volume of blood required (up to 4 ml). Being a whole-blood assay, the CyaA-TB antigen fusion assay offers the advantage of requiring minute volumes of blood (<0.5 ml), as well as being operationally less complex. A recent evaluation of a commercial assay for the diagnosis of LTBI in South African school children reported a high rate of inadequate phlebotomy in 5- to 15-year-old children (27). Further studies are required to evaluate the usefulness of this whole-blood assay system in young children.
A possible limitation, however, of the CyaA-TB antigen fusion assays relates to the background CyaA-E5 response. As the CyaA toxoid derives from genetically detoxified Bordetella adenylate cyclase, it is unknown whether prior vaccination will lead to high background responses and limit the potential usefulness of the assay in young children. This potential problem may, however, be less important with modern acellular pertussis vaccines that do not contain CyaA. In the present study, there was no difference in responses to mock CyaA-E5 between HIV+, HIV+PTB, or HIV– adults. However, when the response to mock CyaA-E5 was high, a significant number of assays yielded indeterminate results.
The CyaA-TB antigen fusion low blood volume IFNGRA represents a novel development for the immunodiagnosis of TB. We have shown that this assay has the potential to identify HIV+ individuals with active TB disease and LTBI. Further work will characterize the nature and effect of the mock CyaA-E5 responses and assess whether these assays hold potential for the diagnosis of active TB disease and LTBI in children.
The European Society of Pediatric Infectious Diseases and the Czech Ministry of Education Youth and Sports had no role in the decision to publish this work or the preparation of the manuscript.
We are grateful to Virginia Azevedo and Helene Visser of the Health Department of the City of Cape Town and to Eric Goemaere of Médecins Sans Frontières for constructive discussions prior to commencing the study. We thank Priscilla Mouton for help with recruitment and obtaining blood samples.
R.J.W., C.L., and P.S. are joint signatories to a patent pending on the diagnostic application of the CyaA-TB proteins. None of the rest of us have a competing interest (financial or otherwise) in the publication of this report.
Published ahead of print on 23 May 2007. ![]()
T.G.C. and M.S.S. are joint first authors. ![]()
This study was designed by K.A.W., M.X.R., L.D., and R.J.W., with a substantial contribution to conception by G.V.C., M.X.R., G.V.C., L.D., and G.A.M. were responsible for counseling, recruiting, and treating the patients involved. M.S., T.G.C., R.S., L.D., and K.A.W. performed and interpreted the IFNGRAs. T.G.C., K.A.W., R.J.W., and N.C. prepared a draft manuscript that was subsequently approved by all of us. ![]()
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