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Clinical and Diagnostic Laboratory Immunology, November 2005, p. 1305-1310, Vol. 12, No. 11
1071-412X/05/$08.00+0 doi:10.1128/CDLI.12.11.1305-1310.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Department of Laboratory Medicine, Children's and Women's Health, Faculty of Medicine, Norwegian University of Science and Technology,1 Laboratory of Medical Microbiology, St. Olav's Hospital, University Hospital, Trondheim, Norway2
Received 7 April 2005/ Returned for modification 11 July 2005/ Accepted 25 August 2005
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, Cß, and R3 or with alpha-like protein 2. Of 60 clinical serotype III GBS strains, 56 (93%) isolates possessed the rib gene and 50 (89%) of the rib-positive isolates expressed levels of R4 detectable by antibody-based tests, consistent with R4 expression failure or low-level expression in
10% of rib-positive GBS. alp3 was not detected in type III GBS but was possessed by six of eight type V strains and six of six type VIII strains. All alp3-positive strains were recognized by the R4/Alp3 common antibodies, but none of them were recognized by the R4-specific antibodies. NCTC 9828, a reference strain for R3 and R4, expressed the determinant R4/Alp3 common but not R4 specific. A monoclonal R4 antibody, previously considered to be R4 specific and used in GBS serotyping, targeted R4/Alp3 common and is thus not R4 specific. The results show that failure to discriminate between R4 specific and R4/Alp3 common by antisera designed for GBS serotyping can result in the false identification of Alp3 as R4 or vice versa, whereas anti-R4 antibodies targeting only the determinant R4 specific will detect only R4. Both R4 and Alp3 need further evaluation with respect to the immunobiological function of each distinct antigenic determinant, for instance, with regard to their potential as GBS vaccine components. |
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(3) (encoded by bca [22]) and Cß (3) (encoded by bac [10]) and the classical R proteins R1, R3, and R4 (8, 18, 35). More recently, protein Rib was described (33), but this protein seems to be identical to the classical R4 protein (1, 30). Alpha-like proteins described recently, Alp2 (encoded by alp2 [16]) and Alp3 (encoded by alp3 [16]), may be variants of the classical R1 protein (19; J. Maeland and R. Valsoe Lyng, Abstr. 13th European Congress of Clinical Microbiology and Infectious Diseases, abstr. P611, 2003). These proteins, except for Cß, belong to a protein family characterized among other things by similarity in primary structure, with up to 100% homology for some of the protein stretches (16, 34), and by their generation of ladder-like patterns on Western blots, probably due to large and identical repeat units which vary in number from strain to strain (9, 22, 34). Horizontal transfer of genetic elements between strains followed by recombinational events has been advocated as an explanation of the structural relatedness and mosaicism of these proteins (16). These proteins may be important virulence factors in GBS, and they elicit antibodies which are protective in animal models (17, 21, 26, 31, 32, 33). Some of the proteins show serological cross-reactivity (17, 19, 31, 32) attributed to structural matching, and this reactivity may hamper the reliability of antibody-based protein detection, for instance, in GBS serotyping. Genotyping instead of serotyping has become an approach to keep clear of this problem (4, 5, 11, 12, 13). Alternatively, or as a supplement to genotyping, it may be possible to increase the reliability of antibody-based GBS typing through better knowledge of the immunological features of the proteins. In an earlier study from this laboratory, it was found that the alpha-like protein Alp3 possessed an antigenic determinant which was also possessed by the R4 protein and was called R4/Alp3 common by us (19). Alp3 also possessed an antigenic determinant which was shared with Alp2 and was named Alp2/Alp3 common (19). PCR results have indicated frequent expression of the Alp3 and R4 proteins (13), and R4 is also known to be frequently expressed on the basis of antibody-based tests (15, 24, 32), meaning a high frequency of expression by GBS strains of the antigenic R4/Alp3 common determinant. Thus, the reliability of R4 detection by antibody-based methods could be seriously hampered by antibodies targeting the Alp3/R4 common determinant, unless the cross-reacting antibodies have been eliminated. On the other hand, reliable antibody-based detection of R4 requires that this protein harbors one or more R4-specific immunological markers. Considerations along these lines encouraged the present study of immunological markers of the R4 protein of GBS.
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TABLE 2. Cross-reactivities of the antigenic determinants R4 specific and R4/Alp3 common with reference and prototype GBS strains, tested by the absorption ELISA
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Antigen preparation. The protein antigens Alp3 and R4 were prepared as described elsewhere (19). Briefly, bacteria were extracted at 4°C with 5% (wt/vol) trichloroacetic acid, and the proteins were purified by gel filtration on a Sephacryl S-200 HR column (Amersham Biosciences), followed by ion-exchange chromatography using a DEAE Sephacel (Amersham Biosciences) column. The final preparations were checked for immunological homogeneity as described previously (27), by immunoblotting, by negative indirect enzyme-linked immunosorbent assay (ELISA) with antisera against GBS strains with no expression of the protein of interest, and by a negative test for capsular polysaccharide antigens. The preparations were stored at 20°C and were used as antigens in ELISA after testing of optimal coating concentrations by checkerboard titration.
Absorption of antisera.
Absorption of antisera with whole cells of GBS was performed either with an excess of whole cells with graded bacterial densities of
1010 CFU ml1 or with fivefold dilutions of this suspension, as described previously (19). The absorption was performed at 20°C for 60 min with frequent shaking of the suspension, followed by centrifugation.
Indirect ELISA and absorption ELISA.
ELISA was performed as described elsewhere (23, 25). Briefly, testing was done in duplicate with the reagents in 50-µl volumes. Phosphate-buffered saline at pH 7.2 with 0.05% (vol/vol) Tween 20 was used as the diluent. Alkaline phosphatase-conjugated anti-rabbit or anti-mouse immunoglobulin antibodies (Sigma-Aldrich) were used to detect binding of the primary antibody, p-nitrophenyl phosphate was used as the substrate, and optical density recordings were done at 405 nm (OD405). ELISA titer was defined as the reciprocal of the highest serum dilution with an OD405 that was
0.200 above the background, which was determined by testing of sera without coating antigen. In the absorption ELISA, a fixed concentration of the antibody corresponding to two times the antibody concentration, which showed an OD405 in the 1.000 to 1.500 range, was added to an equal volume of the bacterial suspension, and the mixture was handled as described above. The supernatant was tested as in the indirect ELISA. OD405 reduction from that of the positive control, which contained unabsorbed antiserum in the same dilution, was calculated and is presented as the percentage of OD reduction. An OD reduction of
20% was considered evidence of antibody binding by the bacteria used for absorption (19).
Competition ELISA. Competition ELISA was performed to test if the murine R4 MAb and the rabbit anti-R4 antibodies targeted the same binding site on the R4 protein. First, the ability of the polyclonal antibody to block the binding of the MAb was examined. Briefly, after washing of the microtiter plates coated with R4, rabbit antiserum in a dilution which corresponded to the ELISA titer divided by 10 was added and incubated at 20°C for 60 min. After the plates were washed, the MAb was added in various dilutions, and the test proceeded as for the indirect ELISA, by using the anti-mouse IgG conjugate (Sigma-Aldrich). The ability of the R4 MAb to inhibit binding of the polyclonal anti-R4 antibodies was tested by applying the antibodies in opposite order and by using an anti-rabbit IgG conjugate. The signaling was matched against that recorded when normal rabbit serum or a murine "nonsense" MAb was used as the competing antibody.
Fluorescent-antibody test (FAT). A whole-cell-based indirect immunofluorescence assay was performed as described elsewhere (2). The fluorescence was graded from 0 to 3+, with scores of 2+ and 3+ indicative of a positive test. All primary antisera were used in a dilution of 1:40, which generated 3+ reactions with positive-control isolates and negative test results with negative-control strains when commercial fluorescent anti-IgG conjugates were used as recommended by the manufacturer (Dako Cytomation).
Western blotting. Western blotting was performed as previously described in detail (25), using material (10 µl) solubilized with hot dodecyl sulfate from whole cells of GBS, applied to 10% (wt/vol) polyacrylamide separating gels, and, after electrophoresis, transferred to polyvinylidene difluoride membranes (Bio-Rad). Probing was done against antisera diluted 1:400. Antibody binding was detected using peroxidase-conjugated anti-immunoglobulin (1:1,000). Strips containing standard proteins were stained with amido black.
Oligonucleotide primers. Primer pairs for the genes alp2, alp3, alp (alp2 plus alp3), and rib were constructed (Eurogentech S.A., Liege, Belgium) according to recommended specifications (13) and as described previously (19) and were as follows: the pair bal23S1-bal2A2 for alp2 (GenBank accession no. AF208158), with an amplicon length of 426 bp; the pair bal23S1-bal3A for alp3 (GenBank accession no. AF245663), with an amplicon length of 321 bp; the pair bcaS1-balA for alp2 plus alp3, with an amplicon length of 446 bp; and the pair ribS2-ribA2 for rib (GenBank accession no. U58333), with an amplicon length of 225 bp.
PCR.
For all primer sets, PCR was performed as described earlier for detection of the C
-encoding gene bca (20), including detection of the PCR products by electrophoresis in 2% (wt/vol) agarose gels. The performance of the PCRs was evaluated by us in a recent study, in which the same primer pairs were used (19).
Sequence analysis. PCR products were purified by using the QIAquick PCR purification kit (QIAGEN). The products were sequenced directly on an ABI 373 DNA sequencer using an ABI PRISM dye terminator cycle sequencing ready reaction kit (PE Applied Biosystems). Alignment analysis of the sequence was performed using the program Sequence Navigator (PE Applied Biosystems).
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, Cß, Alp2, and R3 (Table 2). |
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TABLE 1. Activity of rabbit antibodies against the GBS protein R4 before and after absorption of antisera, as tested by indirect ELISA
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, Alp2, and Alp3 (16), the R4 specific site may be located towards this terminus, while the R4/Alp3 common determinant may be located in the repeats, since the Alp3 and R4 repeats were almost identical (16). However, at the present time, these suggestions are hints which need experimental confirmation, for instance, by epitope mapping. Also, we cannot exclude the possibility that R4 harbors additional antigenic determinants which could not be detected by the experiments performed in this study. Moreover, one or both of the R4 determinants may be immunologically heterogeneous; for instance, each of them may comprise several epitopes, each with a different antigenic specificity. Performance of the anti-R4 antibodies in whole-cell-based immunofluorescence. Since whole-cell-based testing has frequently been used in GBS serotyping, we examined the performance and specificity of the R4 specific and R4/Alp3 common antibodies in a whole-cell-based fluorescent-antibody test, along with testing by PCR for the genes alp2, alp3, and rib, encoding Alp2, Alp3, and R4, respectively. This testing also enabled evaluation of the concordance between gene possession and gene expression. We found that the sequences of the PCR products generated from the strains 12403 (alp2), 64/95 (alp3), JM9 (alp3), and 65604 (rib) matched completely the corresponding stretches of the sequenced genes and that the PCRs showed complete agreement with the known protein expression when our 15 reference and prototype GBS strains were examined. This confirms earlier findings regarding the specificity of the PCRs (13, 19). Figure 1 shows representative PCR results. In the FAT, the anti-R4 specific and anti-R4/Alp3 common sera, prepared by cross-absorption as shown in Table 3, recognized our reference and prototype GBS strains as identical to the antibody binding shown by these strains in the absorption ELISA. In indirect ELISA with extracted antigens, both antisera designed for the FAT recognized GBS proteins, as was expected from the data described above. These results substantiated the supposition that the specificities of the ELISA-reactive and the FAT-reactive antibodies were the same and also showed that both the R4 specific and R4/Alp3 common sites were available for antibody binding at the bacterial cell surfaces. A total of 74 clinical GBS strains of the serotypes III (n = 60), V (n = 8), and VIII (n = 6) were examined by the FAT and by the PCRs. The results are summarized in Table 3.
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FIG. 1. Results representative of PCR for the genes alp2 (lane1), alp3 (lane 2), and rib (lane 3) are shown. The strains 12403 (III/R1alp2; lane 1), JM9 (VIII/R1alp3; lane 2), and 65604 (III/R4rib; lane 3) were tested.
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TABLE 3. Distribution of the R4 protein determinants R4 specific and R4/Alp3 common among serotype III, V, and VIII GBS strains, determined by a FAT, and of the genes alp2, alp3, and rib, determined by PCR
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1010 CFU ml1 for the absorption. All of these isolates showed either no antibody binding, i.e., no reduction of the ELISA signaling, or only minor antibody binding in tests with either category of the anti-R4 antibodies, compared to >95% reduction of signaling by both antibodies when five other GBS strains with strong signaling in the FAT were tested. A rib- and alp-negative type III strain (strain 5/92) caused no OD reduction. These results were corroborated by Western blotting, with representative results shown in Fig. 2A. alp2 occurred among the isolates but rarely (Table 3). Antibody-based testing, as routinely done in our laboratory for GBS serotyping by the FAT (15, 24), showed that none of the 74 GBS strains examined expressed C
, 1 isolate expressed Cß, and 2 strains expressed the R3 protein (Table 3). None of these strains harbored alp2, alp3, or rib. Taken together, the results show that 72 (97%) of the 74 GBS strains examined expressed a ladder-forming protein or possessed a gene(s) known to encode that type of protein. The results substantiate the specificity of the R4 specific antiserum in R4 protein detection, elucidate the consequences of the R4/Alp3 common antibodies in admixture with the R4 specific antibodies in antisera designed for GBS serotyping, and highlight the problem of discrepancy between gene possession and gene expression.
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FIG. 2. Western blots of sodium dodecyl sulfate lysates of some GBS strains with unexpected results in anti-R4 antibody testing, compared to strains with expected results. (A) Type III strains PCR positive for rib and FAT positive for R4 (lanes 1 and 3), rib positive but FAT negative for R4 (lanes 4, 5, and 6), and negative for rib and R4 (lane 2) were tested. The isolates examined were 65604, 5/92, 41/95, 65/95, 14/95, and 29/95 in lanes 1 to 6, respectively. (B) Strain 65604 (III/R4rib) is in lane 1, strain 5/92 (III) in lane 2, and strain 9828 (NT/R3, R4) in lane 3. All lanes were probed against rabbit R4/Alp3 common antibodies diluted 1:400.
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The occurrence and distribution of the alp and rib genes in the GBS strain collection of Norwegian origin agreed well with the findings obtained with Australasian GBS strains (13) and also agreed with the prevalence of R4 expression by isolates in different type III GBS strain collections (15, 24, 33). However, as many as 9 (16%) of the 56 rib-positive type III strains tested in this study were negative when probed against the R4 specific antibodies, in agreement with the notion that a comparatively large proportion of these strains expressed no or very low levels of the R4 protein. Discrepancy between gene possession and gene expression has been found for GBS R proteins (13), for Cß encoded by bac (28), for in vitro mutants containing bca, which encodes C
(29), and for gene clusters which determine capsular polysaccharide synthesis (4, 12). Little is known of the genetic basis of the expression failure except that transcriptional failure was demonstrated in the case of Cß expression failure (28) and that phase variation-like genetic mechanisms probably determined the C
expression failure (29). Changes of regulatory genetic elements similar to those found in the C
mutants (29) may determine the rib/R4 discrepancy in the type III GBS found in the present study. One impact of expression failure will be that antibody-based methods for antigen detection will underestimate the prevalence of gene possession by the bacteria. This is important to consider in relation to choice of methods in epidemiological GBS typing.
R4 MAb F39.
F39 antibody was produced in our laboratory (1), has been considered R4 specific, and has been used extensively for R4 detection in serotyping of clinical GBS isolates and for research purposes (15, 24). To our surprise, the R4 MAb showed a titer of 3,200 in indirect ELISA with both Alp3 and R4 as the coating antigens and showed a positive FAT with both alp3- and rib-positive strains, similar to what occurred with the R4/Alp3 common antibodies, but not with strains which expressed only C
, Cß, Alp2, or R3 (not shown). In competition ELISA, the rabbit R4/Alp3 common antibodies blocked the binding of the murine R4 MAb to R4, whereas the R4 specific antibodies had no blocking activity (Fig. 3). When the MAb was tested for its ability to inhibit the binding to R4 of the rabbit R4/Alp3 common antibodies, the signaling in ELISA generated by the polyclonal antibodies was not affected (not shown). These findings are consistent with the notion that the R4 MAb targeted an epitope within the area of the R4/Alp3 common determinant and that this area, as defined by means of the polyclonal antibodies, included other epitopes in addition to the R4 MAb epitope. These results also showed that animals of different species responded immunologically to the same R4 region, the R4/Alp3 common site. If humans also respond to this region is not known. The reason we misjudged the specificity of the R4 MAb (1) was that we used the reference strain ATCC 12403 (III/R1alp2) to exclude R1 protein recognition by the antibody. However, strain 12403 expresses Alp2, which is devoid of the R4 MAb target (19). The existence of Alp3 was unknown at that time. The R4 MAb can no longer be used as an R4-specific reagent, but it still may have important potential, for instance, in studies of the immunobiological function of the R4/Alp3 common determinant and of antibodies against it.
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FIG. 3. Ability of rabbit anti-R4 antibodies to inhibit binding to R4 by a murine R4 MAb, tested by a competition ELISA. Normal rabbit serum ( ) and antiserum against the antigenic determinants R4 specific ( ) and R4/Alp3 common () were tested for MAb binding inhibition.
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FIG. 4. Capacity of the R protein reference strain NCTC 9828 (NT/R3, R4) (lines a and c) and the R4 prototype strain 65604 (III/R4) (lines b and d) to bind rabbit anti-R4 antibodies, as tested by the absorption ELISA. Binding of the R4 specific antibodies (lines a and b) and the R4/Alp3 common antibodies (lines c and d) is shown. Fivefold dilutions of bacterial suspensions from 1010 CFU ml1 were tested.
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and R4 and normal human serum antibodies target distinct epitopes. J. Med. Microbiol. 52:379-383.
and R4 in sera from pregnant women from Norway and Zimbabwe. Clin. Diagn. Lab. Immunol. 8:1110-1114.
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