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Clinical and Diagnostic Laboratory Immunology, January 2005, p. 180-186, Vol. 12, No. 1
1071-412X/05/$08.00+0 doi:10.1128/CDLI.12.1.180-186.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Animal Diseases Research Institute, Ottawa, Ontario,1 National Centre for Foreign Animal Disease, Winnipeg, Manitoba, Canada2
Received 26 July 2004/ Returned for modification 8 September 2004/ Accepted 24 September 2004
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The biochemical, biological, and functional properties of the envelope glycoprotein Erns have been studied in some detail. This protein forms a disulfide-bridged homodimer in the virion (31, 15) and is highly modified by N-linked glycosylation, which contributes about 50% to the molecular mass of Erns (28, 36). The glycoprotein is both virion associated and secreted, since it is found both on the surface of pestivirus-infected cells and in the culture medium (28). Erns does not contain a potential membrane-spanning domain, yet its C-terminal domain can translocate the full-length protein across eukaryotic cell membranes (13). The protein can bind to several cell types and inhibits CSFV and bovine viral diarrhea virus infection in cell culture, suggesting that Erns is involved in attachment to or entry of the viruses into susceptible cells (7). This interaction is believed to be mediated with cell surface glycoaminoglycans, such as heparan sulfate (9, 10). The Erns protein contains RNase activity (5, 6, 30, 36), which is a unique feature for a viral surface protein. Homology in two stretches of the Erns sequence to members of the Rh/T2/S RNase superfamily provides a structural basis for the RNase activity (15, 30). The biological function of Erns RNase activity is not fully understood; however, destruction of the RNase activity by mutations gives rise to viruses that are more cytopathic in culture and attenuated in vivo (8, 19). Antibodies that inhibit RNase activity also tend to neutralize CSFV infectivity (36). Although cytotoxicity is a feature of other soluble ribonucleases (29), the link has yet to be established for Erns.
Antibodies directed against Erns, E2, and NS3 have been demonstrated in infected animals (14, 16, 21, 22, 24), with Erns and E2 capable of inducing neutralizing antibodies (11, 12, 32). It has been shown that antibodies to full-length Erns or even a 37-mer peptide derived from its C-terminal end (aa 191 to 227) could be used as an indicator of CSFV infection in pigs (14, 21). Recent studies have indicated that an Erns-based enzyme-linked immunosorbent assay (ELISA) can be used as a companion diagnostic test to identify CSFV-infected pigs in herds vaccinated with the E2 subunit marker vaccine (4, 21). However, very little is known about the structural immunogenic organization of Erns. This information would be invaluable for the development of a serological diagnostic test with high sensitivity and specificity. Recently, we have mapped an immunodominant region encompassing three overlapping antigenic regions (ARs) that induce antibody responses during CSFV infection: aa 65 to 145 (Ernsaa 65-145) (AR1), aa 84 to 160 (Ernsaa 84-160) (AR2), and 109 to 220 (Ernsaa 109-220) (AR3) (17). Assignment of these antigenic regions correlates well with the three-dimensional structural model of Erns derived from disulfide bond connectivity and homology modeling (15). Interestingly, the consensus region of the three Erns antigenic regions contained one complete and one partial T-cell epitope sequence as described previously (1). In this study, we measured and compared the antibody responses of pigs to AR1, AR2, AR3, combinations of two or three individual overlapping regions, and the consensus region after experimental infection. The data reported in this study support the selection of an Erns fragment for early detection of antibody in CSFV-infected pigs.
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Sera. Twenty sera from pigs experimentally infected with CSFV (3) were provided by the National Centre for Foreign Animal Diseases (Winnipeg, Manitoba, Canada) and are listed in Table 1. A total of 238 pig serum samples from Canadian herds (classical swine fever [CSF] free) were used for this study.
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TABLE 1. Sera from pigs experimentally infected with various CSFV strains
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Purification of recombinant proteins. Cell pellets were resuspended in phosphate-buffered saline (PBS) (pH 7.2) with 1 mM phenylmethylsulfonyl fluoride and lysed with a French press at 1,500 lb/in2. The homogenates were spun at 27,000 x g for 20 min at 4°C, and the pellet fraction was resuspended in protein extraction buffer (6 M guanidine hydrochloride, 0.1 M NaH2PO4, 0.01 M Tris [pH 8.0]). The solubilized sample was spun again at 27,000 x g for 20 min at 4°C, and the supernatant was loaded onto a column (1 by 3.5 cm) of nickel-nitrilotriacetic acid agarose (QIAGEN, Santa Clarita, Calif.). The column was washed with buffer A (8 M urea, 0.1 M NaH2PO4, 0.01 M Tris [pH 8.0]), followed by buffer B (buffer A plus 0.5 M NaCl [pH 6.3]) and buffer C (buffer B plus 5 mM imidazole [pH 5.9]). The denatured protein was then refolded on the column by washes with Tris-buffered saline (TBS) (pH 7.4) containing 1 M urea, followed by TBS (pH 7.4). The recombinant protein was eluted and collected with fractions of 1 ml from the column using TBS (pH 7.4) containing 200 mM imidazole. The protein fragment Ernsaa 109-160 was further purified by anion exchange chromatography on a column (1.5 by 4 cm) of Q-Sepharose (Amersham Biosciences, Baie d'Urfe, Quebec, Canada) equilibrated with 50 mM phosphate buffer pH (7.8) and eluted over a 0 to 1 M NaCl linear gradient (60 ml) in phosphate buffer. Proteins were quantified by using the Bradford method (2) with bovine serum albumin as a standard.
Optimization of ELISA conditions. Nunc Maxisorp ELISA plates were coated with 1 or 2 µg of purified antigen/ml to determine the optimal concentration of antigen. The purified protein in 0.06 M carbonate buffer (sodium bicarbonate and sodium carbonate [pH 9.6]) was aliquoted into each well (100 µl) and allowed to incubate at room temperature overnight (18 to 20 h). The plates were then frozen at 20°C and were thawed before use. Plates were washed with PBS (pH 7.2) containing 0.05% Tween 20 (PBST). A positive CSFV-infected pig serum (17 days postinfection [dpi]) and a CSFV-negative pig serum were diluted 1/50 and 1/100 in PBST; 100 µl was applied to each well and incubated for 1 h. The plates were washed and incubated for 1 h with horseradish peroxidase-rabbit anti-swine immunoglobulin G (whole molecule) antibody (1/2,000 dilution in PBST), 100 µl/well. The plates were washed and developed for 10 min with shaking in a solution (100 µl/well) of 1 mM 2,2'-azinobis(3-ethylbenzthiazolinesulfonic acid) and 0.015% H2O2 in 50 mM citrate buffer (26 mM trisodium citrate, 24 mM citric acid [pH 4.5]). The absorbances at 414 nm were measured on a Labsystems Multiskan bichromatic plate photometer. In addition, bovine serum albumin (3%) as a blocking reagent and the presence of the divalent cation chelating agents EDTA and EGTA (7.5 mM each; pH 6.3) during the serum incubation step were examined to determine whether these reagents could improve the assay.
Detection of pig antibodies to Erns fragments by ELISA. Based on optimization results, all ELISAs were performed with the purified antigen coated at 2 µg/ml and the pig sera diluted 1/100 in PBST containing 7.5 mM of each of EDTA and EGTA (pH 6.3) to reduce the background signal. Twenty CSFV antisera from experimentally infected pigs representing a variety of animals, virus strains, and days postinfection (Table 1) were tested with all nine defined Erns fragments. Also, 238 negative pig sera were tested for each protein.
Data analysis. Receiver operating characteristic (ROC) analysis of the ELISA results was performed using the statistical program MedCalc, version 7.3 (MedCalc Software, Mariakerke, Belgium). The values for the area under the ROC curve, the 95% confidence interval (CI) for the area, and cutoff points were derived from the ROC curve analysis. An area of X means that a randomly selected individual from the positive group has a test value larger than that for a randomly chosen individual from the negative group 100X % of the time. A test that gives a perfect separation of the values of the two groups has an area of 1, whereas a noninformative test that cannot distinguish between the two groups has an area of 0.5. A 95% CI for the area, which does not include the 0.5 value, indicates that the test has an ability to distinguish between the two groups.
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FIG. 1. Optimization of the concentration of coating antigens and dilutions of serum for ELISA. Several recombinant proteins, Ernsaa 112-227E1aa 1-7 (A), Ernsaa 109-160 (B), and Ernsaa 109-145 (C), at 1 and 2 µg/ml, were tested for reactivity with one positive serum (S#3) and one negative serum at 1/50 and 1/100 dilutions, respectively. Each bar represents the mean value of two determinations.
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FIG. 2. Influence of BSA (blocking reagent) and divalent cation chelating agents on ELISA. Ernsaa 112-227E1aa 1-7 (2 µg/ml) was immobilized on an ELISA plate and reacted with one positive serum (S#3) and one negative serum at 1/50 and 1/100 dilutions. Four assay conditions were examined for each serum dilution: (i) dilution of pig sera in PBST; (ii) blocking of the plate with 3% BSA in PBST prior to adding pig serum (diluted in PBST); (iii) dilution of pig serum in PBST containing EDTA/EGTA (7.5 mM each; pH 6.3); and (iv) blocking of the plate with 3% BSA in PBST prior to adding pig serum (diluted in PBST containing EDTA and EGTA).
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FIG. 3. Detection of antibody responses of pigs to AR1, AR2, and AR3 of Erns by ELISA. Twenty serum samples from CSFV-infected pigs and 238 negative pig sera were analyzed for reactivity with immobilized AR1 (A), AR2 (B), and AR3 (C), using the optimized conditions as described in the text. Dilution buffer without testing serum served as a control. The optimum cutoff determined by ROC analysis is indicated by a solid line. A higher cutoff eliminating all false positives (100% specificity) is indicated by a dashed line. The location of each Erns fragment relative to the full-length protein is marked (shaded) in the insets.
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FIG. 4. Detection of antibody responses of pigs to AR12, AR23, and AR123 of Erns by ELISA. Erns fragments corresponding to overlapping antigenic regions AR12 (A), AR23 (B), and AR123 (C) were used as coating antigens. The assay conditions and data presentation are as described in the legend to Fig. 3.
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FIG. 5. Detection of antibody responses to the consensus region of overlapping AR1, AR2, and AR3. Ernsaa 109-145 (A), corresponding to the consensus region defined by AR1, AR2, and AR3, and Ernsaa 109-160 (B), a fragment that is 15 amino acids larger than the consensus region, were used as coating antigens. The assay conditions and data presentation are as described in the legend to Fig. 3.
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FIG. 6. Detection of antibody responses to the Ernsaa 121-227E1aa 1-7 fragment containing the C-terminal end (37 residues). The assay conditions and data presentation are as described in the legend to Fig. 3.
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ROC analysis revealed that there is a significant difference in the antibody responses to individual ARs. When the cutoffs were raised above the optimum value calculated by ROC analysis to completely eliminate the false-positive reactions in negative samples, AR1 and AR3 reacted with only a few sera of CSFV-infected pigs, such as S#3, S#7, S#18, S#19, and S#14 (reactive with AR3 only). All of these reactive sera were collected at 35 days postinfection (dpi) or later. This tends to suggest that antibody responses to AR1 or AR3 appear during the late stages of infection. In contrast, AR2 could be used to detect antibodies in a much greater number of sera from infected animals, ranging from 14 to 210 dpi (S#12 and S#16). This indicates that antibody responses directed against AR2 occurred during both early and late infection. Antibody responses to the C-terminal end (37 aa) of Erns were previously demonstrated to be an indicator of CSFV infection (14). For comparison, antibody responses to the C-terminal end (37 residues)-containing fragment Ernsa a121-227E1aa 1-7 were also determined (Fig. 6). This fragment, though not recognized by antisera from CSFV-infected pigs on Western blots (17), was able to react with anti-CSFV antisera on ELISA after refolding and eluting from a Ni-agarose column using the method previously described (16). Reaction of Ernsaa 121-227E1aa 1-7 with pig antisera was much weaker than that of other defined Erns fragments, indicating that this region is not immunodominant. This further supports the immunodominant nature of an Erns region encompassing three overlapping antigenic regions, AR1, AR2, and AR3 (17).
As expected, the combination of overlapping AR1 and AR2 or AR2 and AR3 (i.e., AR12 or AR23) allowed detection of more positive antibody responses in the 20 serum samples from CSFV-infected pigs than AR1 or AR3 alone at the cutoff of 100% specificity (Fig. 4). Compared to AR2, AR12 resulted in a similar number of positive antibody responses, while use of AR23 detected more positive responses. This indicates that AR2 makes a major contribution to the sensitivity of detection from the overlapping combination; the contribution of AR1 is insignificant, while AR3 appears to enhance the detection sensitivity. Surprisingly, the number of antibody responses to AR123 is similar to that with AR1 or AR3 but is much smaller than that with AR2. The reason for this unexpected result is not clear. Perhaps some antibody binding sites could have been masked by the additional sequences surrounding AR2.
Our previous data showed that Ernsaa 109-145, the consensus region defined by AR1, AR2, and AR3, and Ernsaa 109-160, a fragment 15 amino acids larger than the consensus region, were not recognized by CSFV antisera on Western blots (17). The present data show that both Ernsaa 109-145 and Ernsaa 109-160, after refolding and eluting from a Ni-agarose column, were recognized by antibodies in sera from CSFV-infected animals in ELISA. This result provides evidence that the epitopes located within the consensus region are conformational. This is consistent with the proposed three-dimensional model of Erns (15), which predicts the cysteine-rich consensus region to be on a large surface-exposed loop between helix 6 and helix 7 and likely to form two disulfide bonds in this region. A comparison of the ELISA results from Ernsaa 109-145 and Ernsaa 109-160 with a larger Erns fragment (AR123) that contains the consensus sequences reveals that the consensus region detected more positive serum samples than AR123 at a 100% specificity cutoff. This, together with other results, suggests that extra residues added to the N-terminal end of Ernsaa 109-145 reduce the binding of antibodies to Ernsaa 109-145, possibly by masking or altering the epitopes within the consensus region. Use of relatively smaller fragments, AR23 and AR2, both of which contain Ernsaa 109-145, detected a similar number of antibody responses in pigs after infection compared to use of Ernsaa 109-145. This provides further support that additional N-terminal amino acid sequences interfere with binding of antibodies to Ernsaa 109-145.
The 20 serum samples from infected pigs used in the study cover various days postinfection (Table 1). Inspection of the ELISA data (OD414) associated with each of the 20 serum samples (Fig. 3, 4, and 5) has allowed us to make the interesting observation that AR2, AR23, Ernsaa 109-145, and Ernsaa 109-160 tend to detect a nearly full spectrum of antibody responses, including those during early infection. In particular, antibody responses to AR23 or Ernsaa 109-160 can be detected as early as 7 dpi. These small Erns fragments offer an advantage over the entire protein, which can only be used to detect CSFV-specific antibodies in vaccinated or unvaccinated pigs as early as 14 dpi (21). None of the nine defined Erns fragments was capable of detecting anti-Erns antibodies in sera S#5 and S#20 of infected pigs. These two sera were collected in early infection (8 days postchallenge [dpc] and 7 dpi), and most likely anti- Erns antibodies had not yet been induced. Other Erns fragments tend to detect only antibodies arising in the later stages of infection. Exploration of this striking difference will allow development of an Erns fragment-based ELISA for the serological detection of CSFV infection at various stages of infection. Selection of a small Erns fragment, such as Ernsaa 109-145 and Ernsaa 109-160 or a synthetic peptide corresponding to Ernsaa 109-145, would offer a diagnostic antigen superior to the full-length protein. Production of recombinant Erns fragments in large quantity from this study will facilitate the development and validation of a test that can be used for serological survey in a CSF-free country (e.g., Canada) in biocontainment level 2 laboratories.
This work was supported in part by Diachemix Corporation (Grayslake, Ill.).
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